Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
437
accessible chromatin
356
target gene predictions
328
candidate regulatory elements
210
histone modifications
197
chromatin state
100
binding sites
58
variant allelic effects
44
eQTL
41
gene expression
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
487
September, 2022
334
February, 2021
333
November, 2021
188
May, 2021
117
February, 2024
May, 2020
56
January, 2021
53
June, 2020
40
May, 2022
37
January, 2022
31
October, 2022
23
January, 2020
19
April, 2020
17
August, 2021
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
2
November, 2020
1
June, 2021
Available data
1514
bed bed3+
tsv
364
bigWig
164
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1794
Homo sapiens
Biosample type
2380
tissue
2328
cell line
1794
primary cell
388
in vitro differentiated cells
4
stem cell
Organ
501
epithelium
241
connective tissue
116
vasculature
100
skin of body
82
blood vessel
79
pancreas
65
kidney
49
musculature of body
46
mammary gland
42
liver
41
penis
40
extraembryonic component
34
lung
31
heart
28
brain
24
artery
23
intestine
22
embryo
22
eye
18
vein
16
bronchus
13
bone element
12
bone marrow
12
lymphatic vessel
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1383
AMP
333
ENCODE
59
T1D
19
LungMap
Genome assembly (visualization)
1722
hg19
697
GRCh38
month_released!
May, 2020
files.file_type!
tsv
BIOSAMPLE
TYPE
1794 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
gene expression
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
16
1
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
2
4
7
30
1
B cell
4
9
14
8
CD4-positive, alpha-beta memory T cell
9
14
9
+ See 328 more…
See all biosamples
Download