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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
211
accessible chromatin
120
target gene predictions
75
gene expression
53
chromatin state
48
candidate regulatory elements
30
differential activity
26
variant allelic effects
11
binding sites
4
histone modifications
3
eQTL
2
caQTL
Date released
February, 2021
September, 2023
151
September, 2022
127
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
25
June, 2020
23
August, 2021
20
January, 2021
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
424
bed bed3+
172
bigWig
84
tsv
50
bed bed9
12
txt
11
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
583
Homo sapiens
Biosample type
487
primary cell
49
tissue
27
cell line
20
in vitro differentiated cells
Organ
583
epithelium
334
brain
324
connective tissue
305
kidney
278
musculature of body
241
lung
240
pancreas
218
intestine
196
heart
176
limb
167
vasculature
162
embryo
144
bodily fluid
137
blood
137
blood vessel
136
skin of body
128
large intestine
127
liver
113
extraembryonic component
90
eye
90
stomach
73
uterus
66
small intestine
63
adipose tissue
59
adrenal gland
59
mammary gland
55
placenta
52
bone element
50
artery
49
prostate gland
43
ureter
38
gonad
37
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
19
lymphoid tissue
19
nerve
19
ovary
19
thyroid gland
18
testis
15
mouth
14
vein
12
pituitary gland
11
bronchus
11
lymphatic vessel
10
breast
9
skeleton
9
urinary bladder
8
tongue
8
vagina
7
bone marrow
4
nose
1
pericardium
1
trachea
Project
427
AMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
477
hg19
233
GRCh38
month_released!
May, 2020
February, 2021
September, 2023
BIOSAMPLE
TYPE
583 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
chromatin state
candidate regulatory elements
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
15
7
5
2
1
2
hepatocyte
8
3
10
1
1
1
3
pancreatic beta cell
8
2
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
pancreatic acinar cell
6
3
3
3
1
+ See 95 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
2
2
esophagus squamous epithelium
1
2
2
2
pancreatic ductal cell
2
breast - mammary tissue
1
+ See 11 more…
cell line
EndoC_BH1
8
1
8
3
colon epithelial cell
1
1
1
choroid plexus epithelial cell
1
epithelial cell of prostate
1
glomerular visceral epithelial cell
1
+ See 1 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
+ See 4 more…
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