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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
accessible chromatin
21
target gene predictions
20
gene expression
17
chromatin state
14
candidate regulatory elements
8
binding sites
8
eQTL
7
histone modifications
4
differential activity
3
Fine-mapped variants
1
caQTL
1
variant allelic effects
Date released
46
September, 2022
29
February, 2024
February, 2021
10
August, 2021
10
March, 2020
5
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
May, 2020
3
May, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
77
bed bed3+
24
tsv
22
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
127
Homo sapiens
Biosample type
53
primary cell
48
tissue
20
cell line
6
in vitro differentiated cells
Organ
738
epithelium
445
kidney
339
connective tissue
337
brain
278
musculature of body
241
lung
240
pancreas
218
intestine
202
vasculature
196
heart
176
limb
162
embryo
157
blood vessel
144
bodily fluid
137
blood
136
skin of body
128
large intestine
127
liver
113
extraembryonic component
90
eye
90
stomach
73
uterus
66
small intestine
63
adipose tissue
59
adrenal gland
59
mammary gland
55
artery
55
placenta
52
bone element
49
prostate gland
43
ureter
38
gonad
37
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
19
lymphoid tissue
19
nerve
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
15
mouth
14
vein
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
tongue
8
vagina
7
bone marrow
4
nose
1
pericardium
1
trachea
Project
122
AMP
5
ENCODE
Genome assembly (visualization)
100
hg19
59
GRCh38
2
hg18
month_released!
May, 2020
February, 2021
BIOSAMPLE
TYPE
127 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
chromatin state
candidate regulatory elements
binding sites
eQTL
histone modifications
differential activity
Fine-mapped variants
caQTL
variant allelic effects
primary cell
hepatocyte
8
3
10
1
1
3
1
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
pancreatic endothelial cell
1
3
tissue
liver
4
10
1
9
7
7
1
1
right lobe of liver
1
1
1
1
1
3
cell line
HepG2
1
3
2
1
2
4
HuH-7
1
1
1
1
HuH-7.5
1
1
1
in vitro differentiated cells
hepatocyte
1
1
1
hepatocyte(AFP)
3
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