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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
70
accessible chromatin
61
target gene predictions
42
gene expression
33
differential activity
32
chromatin state
27
candidate regulatory elements
14
eQTL
7
variant allelic effects
5
Fine-mapped variants
4
binding sites
2
sQTL
2
variant to gene
Date released
86
September, 2022
February, 2021
47
March, 2023
35
May, 2021
26
February, 2024
24
November, 2021
20
January, 2021
9
March, 2020
8
August, 2021
8
June, 2020
7
August, 2018
May, 2020
6
October, 2019
4
August, 2017
4
January, 2020
4
January, 2022
3
October, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
174
bed bed3+
70
tsv
55
bigWig
27
bed bed9
11
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
299
Homo sapiens
Biosample type
153
primary cell
88
tissue
54
cell line
4
in vitro differentiated cells
Organ
738
epithelium
445
kidney
341
connective tissue
337
brain
278
musculature of body
241
lung
240
pancreas
218
intestine
202
vasculature
196
heart
176
limb
162
embryo
157
blood vessel
144
bodily fluid
137
blood
136
skin of body
128
large intestine
127
liver
113
extraembryonic component
90
eye
90
stomach
73
uterus
66
small intestine
63
adipose tissue
59
adrenal gland
59
mammary gland
55
artery
55
placenta
52
bone element
49
prostate gland
43
ureter
38
gonad
37
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
19
lymphoid tissue
19
nerve
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
15
mouth
14
vein
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
tongue
8
vagina
7
bone marrow
4
nose
1
pericardium
1
trachea
Project
253
AMP
24
ENCODE
20
T1D
2
community
Genome assembly (visualization)
214
hg19
79
GRCh38
month_released!
May, 2020
February, 2021
BIOSAMPLE
TYPE
299 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
differential activity
chromatin state
candidate regulatory elements
eQTL
variant allelic effects
Fine-mapped variants
binding sites
sQTL
variant to gene
primary cell
pancreatic beta cell
8
2
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
pancreatic ductal cell
6
3
3
3
1
pancreatic alpha cell
7
2
3
3
+ See 17 more…
tissue
islet of Langerhans
4
1
5
3
12
2
1
2
2
body of pancreas
5
2
4
4
1
3
pancreas
5
5
3
2
1
endocrine pancreas
4
4
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
1
8
3
MCF-7
1
6
5
5
1
T47D
2
2
2
Panc1
2
1
1
8988T
1
1
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
mammary gland epithelial cell
1
See all biosamples
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