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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1339
target gene predictions
977
histone modifications
907
chromatin state
845
accessible chromatin
817
binding sites
681
gene expression
171
eQTL
167
differential activity
74
Fine-mapped variants
61
variant allelic effects
12
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
65
January, 2020
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
835
bed bed3+
468
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
845
Homo sapiens
Biosample type
424
primary cell
189
tissue
163
cell line
69
in vitro differentiated cells
Organ
209
epithelium
85
connective tissue
63
pancreas
59
eye
47
kidney
40
brain
35
vasculature
26
heart
25
blood vessel
24
musculature of body
23
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
1
vein
Project
575
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
837
hg19
378
GRCh38
month_released!
May, 2020
January, 2018
May, 2022
BIOSAMPLE
TYPE
845 results
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Clear Filters
accessible chromatin
primary cell
monocyte
16
fibroblast
14
endothelial cell
13
excitatory neuron
12
macrophage
11
+ See 203 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
heart
5
pancreas
5
+ See 92 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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