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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
28
candidate regulatory elements
17
target gene predictions
15
chromatin state
12
binding sites
7
accessible chromatin
5
histone modifications
1
gene expression
1
variant allelic effects
Date released
42
September, 2022
28
February, 2021
6
November, 2021
4
June, 2020
3
October, 2022
May, 2021
1
August, 2017
1
February, 2020
1
February, 2024
Available data
71
bed bed3+
14
bed bed9
3
bigWig
Organism
86
Homo sapiens
Biosample type
46
primary cell
35
cell line
3
in vitro differentiated cells
2
tissue
Organ
900
epithelium
633
kidney
436
brain
434
connective tissue
364
musculature of body
307
lung
283
intestine
248
vasculature
240
heart
238
pancreas
231
limb
214
bodily fluid
208
embryo
203
blood
199
skin of body
190
blood vessel
169
large intestine
150
liver
143
extraembryonic component
117
stomach
107
eye
88
bone element
85
mammary gland
83
adipose tissue
83
small intestine
81
uterus
76
prostate gland
72
placenta
71
adrenal gland
68
artery
63
penis
61
lymph node
61
ureter
49
gonad
47
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
24
lymphoid tissue
22
nerve
22
ovary
22
thyroid gland
21
lymphatic vessel
20
vein
19
mouth
18
skeleton
16
bronchus
12
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
80
AMP
6
ENCODE
Genome assembly (visualization)
85
hg19
20
GRCh38
month_released!
May, 2020
May, 2021
BIOSAMPLE
TYPE
86 results
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candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
variant allelic effects
primary cell
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
4
1
fibroblast of mammary gland
2
1
1
2
1
1
myoepithelial cell of mammary gland
4
2
2
luminal epithelial cell of mammary gland
1
3
1
2
+ See 1 more…
cell line
MCF-7
9
5
5
3
1
2
T47D
3
2
2
MCF 10A
3
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
tissue
mammary gland
1
1
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