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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1200
target gene predictions
chromatin state
863
histone modifications
819
accessible chromatin
817
binding sites
593
gene expression
168
eQTL
167
differential activity
74
Fine-mapped variants
61
variant allelic effects
12
caQTL
4
variant to gene
3
pQTL
2
sQTL
1
other
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
1678
September, 2022
May, 2021
373
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
101
October, 2022
83
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
44
November, 2022
32
February, 2023
30
March, 2024
19
April, 2020
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5448
bed bed3+
812
tsv
471
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6454
Homo sapiens
Biosample type
2096
cell line
2051
tissue
1919
primary cell
385
in vitro differentiated cells
3
stem cell
Organ
845
epithelium
556
kidney
383
connective tissue
364
brain
287
musculature of body
236
lung
224
intestine
221
pancreas
216
vasculature
190
heart
187
bodily fluid
183
limb
180
embryo
178
blood
164
skin of body
163
blood vessel
133
large intestine
131
liver
110
extraembryonic component
98
eye
93
stomach
77
uterus
73
adipose tissue
73
bone element
70
mammary gland
63
prostate gland
63
small intestine
61
artery
57
adrenal gland
56
placenta
53
lymph node
53
penis
48
ureter
41
gonad
38
esophagus
36
thymus
34
spinal cord
27
spleen
22
testis
19
lymphatic vessel
19
lymphoid tissue
19
nerve
18
ovary
18
thyroid gland
15
mouth
15
skeleton
15
vein
14
bronchus
10
bone marrow
10
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
5747
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5577
hg19
891
GRCh38
4
hg18
month_released!
May, 2020
May, 2022
May, 2021
annotation_type!
chromatin state
BIOSAMPLE
TYPE
6456 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
variant to gene
pQTL
sQTL
other
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
54
1
H1-hESC
1
38
1
1
2
8
A549
21
18
1
1
2
K562
7
22
1
1
2
MCF-7
9
5
2
1
3
+ See 762 more…
tissue
heart
37
20
1
5
1
3
stomach
40
19
1
3
1
1
kidney
29
14
2
10
1
7
1
brain
29
16
3
2
1
1
2
lung
33
17
1
1
+ See 253 more…
primary cell
common myeloid progenitor, CD34-positive
27
13
endothelial cell
7
1
13
2
8
1
2
2
hepatocyte
1
2
4
8
1
13
1
fibroblast
4
14
1
2
6
B cell
14
8
4
+ See 424 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
2
1
4
1
1
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 108 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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