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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
202
gene expression
160
candidate regulatory elements
78
chromatin state
76
target gene predictions
56
differential activity
48
accessible chromatin
7
binding sites
6
histone modifications
4
eQTL
Date released
228
September, 2022
188
February, 2021
140
September, 2023
28
August, 2021
May, 2020
16
June, 2020
14
January, 2020
9
February, 2020
3
March, 2020
3
November, 2021
2
March, 2024
2
October, 2022
1
April, 2019
1
February, 2024
1
January, 2022
1
May, 2019
Available data
298
bed bed3+
251
tsv
87
txt
78
bed bed9
33
bigWig
2
bigBed bed9
Organism
637
Homo sapiens
Biosample type
303
primary cell
289
tissue
40
cell line
5
in vitro differentiated cells
Organ
932
epithelium
633
kidney
447
brain
447
connective tissue
367
musculature of body
311
lung
289
intestine
271
pancreas
251
vasculature
244
heart
234
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
151
liver
146
extraembryonic component
119
stomach
107
eye
87
bone element
87
mammary gland
86
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
494
AMP
140
KPMP
3
ENCODE
Genome assembly (visualization)
377
hg19
103
GRCh38
month_released!
May, 2020
May, 2022
BIOSAMPLE
TYPE
637 results
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Clear Filters
gene expression
candidate regulatory elements
chromatin state
target gene predictions
differential activity
accessible chromatin
binding sites
histone modifications
eQTL
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
1
1
2
glomerular visceral epithelial cell
5
2
1
1
2
kidney tubule cell
1
3
2
2
2
kidney glomerular epithelial cell
1
2
1
1
2
+ See 63 more…
tissue
kidney
7
29
16
14
10
1
2
1
right kidney
20
10
10
renal cortex interstitium
20
9
9
1
renal pelvis
19
9
9
2
left kidney
18
9
9
+ See 14 more…
cell line
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
G401
2
1
1
+ See 7 more…
in vitro differentiated cells
olfactory neurosphere cell line
1
1
1
1
renal cell carcinoma
1
See all biosamples
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