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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
63
accessible chromatin
48
gene expression
44
target gene predictions
33
differential activity
24
candidate regulatory elements
17
chromatin state
15
eQTL
7
variant allelic effects
6
histone modifications
5
Fine-mapped variants
binding sites
2
sQTL
2
variant to gene
Date released
47
March, 2023
44
September, 2022
33
May, 2021
27
February, 2021
25
February, 2024
20
January, 2021
18
November, 2021
8
August, 2021
8
March, 2020
7
August, 2018
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
4
June, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
148
bed bed3+
76
tsv
55
bigWig
14
bigBed narrowPeak
13
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
266
Homo sapiens
Biosample type
125
primary cell
106
tissue
32
cell line
3
in vitro differentiated cells
Organ
889
epithelium
626
kidney
431
brain
416
connective tissue
360
musculature of body
302
lung
283
intestine
266
pancreas
239
heart
232
limb
230
vasculature
202
embryo
186
skin of body
177
blood vessel
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
138
liver
119
stomach
101
eye
84
adipose tissue
84
small intestine
79
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
64
artery
61
ureter
57
penis
50
lymph node
47
gonad
47
thymus
45
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
22
nerve
19
lymphatic vessel
19
mouth
18
skeleton
18
vein
14
bronchus
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
9
bone marrow
4
nose
3
trachea
1
pericardium
Project
226
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
175
hg19
59
GRCh38
month_released!
May, 2020
May, 2022
annotation_type!
binding sites
BIOSAMPLE
TYPE
266 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic beta cell
8
3
3
3
1
pancreatic ductal cell
6
3
3
3
1
2
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
+ See 12 more…
tissue
islet of Langerhans
4
11
1
3
13
1
2
2
2
body of pancreas
2
5
8
4
1
3
pancreas
5
5
5
3
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8
1
3
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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