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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
37
candidate regulatory elements
target gene predictions
10
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
2
eQTL
2
gene expression
Date released
September, 2022
46
February, 2021
7
June, 2020
3
August, 2017
3
November, 2021
2
January, 2022
2
March, 2024
1
February, 2024
1
October, 2022
Available data
61
bed bed3+
3
bigWig
2
tsv
Organism
65
Homo sapiens
Biosample type
44
tissue
18
cell line
3
primary cell
Organ
710
epithelium
408
kidney
293
connective tissue
251
brain
197
pancreas
169
vasculature
154
musculature of body
127
blood vessel
123
heart
111
bodily fluid
107
intestine
106
blood
100
liver
93
limb
93
lung
92
skin of body
80
eye
77
embryo
65
large intestine
57
adipose tissue
47
artery
45
bone element
44
extraembryonic component
43
stomach
40
mammary gland
37
lymph node
37
prostate gland
33
penis
24
adrenal gland
24
placenta
23
gonad
23
small intestine
22
ureter
21
esophagus
18
spinal cord
17
uterus
14
lymphatic vessel
14
spleen
14
testis
13
nerve
13
thymus
13
vein
9
bronchus
9
skeleton
9
thyroid gland
8
bone marrow
8
lymphoid tissue
8
ovary
7
mouth
6
breast
5
trachea
4
tongue
4
vagina
3
pituitary gland
3
urinary bladder
1
nose
1
pericardium
Project
62
AMP
3
ENCODE
Genome assembly (visualization)
61
hg19
5
GRCh38
month_released!
May, 2020
September, 2022
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
65 results
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Clear Filters
candidate regulatory elements
accessible chromatin
binding sites
histone modifications
chromatin state
eQTL
gene expression
tissue
large intestine
15
1
1
sigmoid colon
5
1
transverse colon
4
1
1
colonic mucosa
2
1
1
mucosa of rectum
2
1
+ See 7 more…
cell line
HT-29
1
1
1
1
RKO
1
1
1
1
SW480
1
1
1
1
HCT-116 cell
1
2
Caco-2
1
+ See 2 more…
primary cell
colon epithelial cell
3
See all biosamples
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