Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
March, 2024
1
March, 2020
1
October, 2022
Available data
137
bed bed3+
33
bed bed9
3
bigWig
Organism
172
Homo sapiens
Biosample type
132
tissue
34
cell line
6
primary cell
Organ
932
epithelium
631
kidney
450
connective tissue
446
brain
368
musculature of body
310
lung
286
intestine
271
pancreas
250
vasculature
244
heart
233
limb
217
bodily fluid
215
embryo
206
blood
202
skin of body
192
blood vessel
172
large intestine
153
liver
146
extraembryonic component
117
stomach
107
eye
88
bone element
87
mammary gland
adipose tissue
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
70
artery
64
penis
62
lymph node
61
ureter
48
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
nerve
22
ovary
22
thyroid gland
21
lymphatic vessel
20
vein
18
mouth
18
skeleton
16
bronchus
12
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
166
AMP
6
ENCODE
Genome assembly (visualization)
170
hg19
43
GRCh38
month_released!
May, 2020
March, 2024
organ_slims!
adipose tissue
BIOSAMPLE
TYPE
172 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 5 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
Download