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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
58
accessible chromatin
16
candidate regulatory elements
8
chromatin state
8
target gene predictions
6
binding sites
histone modifications
1
eQTL
1
gene expression
Date released
24
February, 2023
24
September, 2022
22
November, 2022
12
February, 2021
5
June, 2020
4
November, 2021
2
February, 2020
2
January, 2020
May, 2020
2
October, 2022
1
February, 2024
Available data
88
bed bed3+
36
bigWig
8
bed bed9
2
tsv
Organism
98
Homo sapiens
Biosample type
67
tissue
17
primary cell
8
cell line
6
in vitro differentiated cells
Organ
906
epithelium
627
kidney
connective tissue
399
brain
363
musculature of body
307
lung
281
intestine
265
pancreas
243
vasculature
238
heart
232
limb
204
embryo
193
bodily fluid
191
skin of body
187
blood vessel
183
blood
169
large intestine
141
extraembryonic component
139
liver
118
stomach
103
eye
85
adipose tissue
84
small intestine
82
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
placenta
65
artery
61
ureter
59
penis
58
lymph node
49
gonad
47
thymus
45
esophagus
43
spinal cord
34
spleen
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
20
lymphatic vessel
20
vein
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
94
AMP
4
ENCODE
Genome assembly (visualization)
96
hg19
15
GRCh38
month_released!
May, 2020
organ_slims!
connective tissue
annotation_type!
histone modifications
BIOSAMPLE
TYPE
98 results
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accessible chromatin
candidate regulatory elements
chromatin state
target gene predictions
binding sites
eQTL
gene expression
tissue
retina
23
6
3
3
1
1
1
pigmented layer of retina
20
eye
1
4
2
2
primary cell
retinal pigment epithelial cell
3
2
1
1
2
iris pigment epithelial cell
1
2
1
1
Muller cell
2
retinal bipolar neuron
1
cell line
WERI-Rb-1
1
2
1
1
2
retinal cell
1
in vitro differentiated cells
retinal pigment epithelial cell
6
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