Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
474
gene expression
431
accessible chromatin
348
target gene predictions
322
candidate regulatory elements
209
histone modifications
194
chromatin state
152
differential activity
98
binding sites
58
variant allelic effects
44
eQTL
10
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
478
September, 2022
450
February, 2021
323
November, 2021
281
September, 2023
255
May, 2021
152
February, 2024
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
31
October, 2022
23
January, 2020
19
April, 2020
12
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
3
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1490
bed bed3+
589
tsv
358
bigWig
161
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2352
Homo sapiens
Biosample type
2389
tissue
2352
primary cell
2341
cell line
462
in vitro differentiated cells
4
stem cell
Organ
806
epithelium
303
kidney
276
connective tissue
161
vasculature
126
pancreas
110
blood vessel
100
skin of body
60
liver
49
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
34
lung
heart
29
artery
28
brain
23
intestine
22
embryo
22
eye
18
vein
17
lymphatic vessel
16
bronchus
13
bone element
12
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1670
AMP
323
ENCODE
281
KPMP
59
T1D
19
LungMap
Genome assembly (visualization)
1696
hg19
692
GRCh38
month_released!
May, 2020
organ_slims!
heart
BIOSAMPLE
TYPE
2352 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
16
1
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
2
4
7
30
1
endothelial cell
9
15
7
1
2
2
1
2
B cell
2
4
9
14
8
+ See 434 more…
See all biosamples
Download