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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
221
gene expression
159
accessible chromatin
100
candidate regulatory elements
96
target gene predictions
65
differential activity
53
chromatin state
40
binding sites
25
histone modifications
21
variant allelic effects
3
eQTL
2
caQTL
Date released
187
February, 2021
155
September, 2023
147
September, 2022
105
November, 2021
55
February, 2024
24
June, 2020
23
August, 2021
15
November, 2022
14
January, 2020
May, 2020
11
February, 2023
9
May, 2021
8
February, 2020
7
April, 2020
6
October, 2022
5
March, 2020
4
March, 2023
3
August, 2017
2
January, 2021
2
March, 2024
2
May, 2022
1
July, 2020
Available data
447
bed bed3+
274
tsv
127
bigWig
78
txt
50
bed bed9
3
csv
2
bigBed bed9
1
bigBed narrowPeak
Organism
785
Homo sapiens
Biosample type
689
primary cell
54
tissue
23
in vitro differentiated cells
19
cell line
Organ
934
epithelium
633
kidney
450
connective tissue
447
brain
370
musculature of body
311
lung
289
intestine
pancreas
251
vasculature
heart
234
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
88
bone element
87
mammary gland
86
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
516
AMP
155
KPMP
105
ENCODE
7
LungMap
2
T1D
Genome assembly (visualization)
498
hg19
198
GRCh38
month_released!
May, 2020
organ_slims!
pancreas
heart
BIOSAMPLE
TYPE
785 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
13
8
1
3
1
1
4
1
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
2
2
1
1
foreskin keratinocyte
11
4
4
+ See 129 more…
tissue
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
kidney epithelium
1
1
breast - mammary tissue
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 3 more…
cell line
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 3 more…
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