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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
26
accessible chromatin
25
candidate regulatory elements
24
gene expression
23
target gene predictions
19
chromatin state
16
histone modifications
15
binding sites
8
eQTL
4
differential activity
3
Fine-mapped variants
1
caQTL
1
variant allelic effects
Date released
49
September, 2022
31
February, 2021
29
February, 2024
10
August, 2021
10
March, 2020
6
November, 2021
5
June, 2020
4
March, 2023
May, 2020
3
August, 2017
3
January, 2020
3
May, 2021
3
May, 2022
2
February, 2020
2
January, 2021
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
109
bed bed3+
28
tsv
25
bigWig
15
bed bed9
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
165
Homo sapiens
Biosample type
72
primary cell
58
tissue
28
cell line
7
in vitro differentiated cells
Organ
934
epithelium
633
kidney
450
connective tissue
447
brain
370
musculature of body
311
lung
289
intestine
271
pancreas
251
vasculature
244
heart
234
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
88
bone element
87
mammary gland
86
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
157
AMP
6
ENCODE
2
T1D
Genome assembly (visualization)
134
hg19
62
GRCh38
2
hg18
month_released!
May, 2020
BIOSAMPLE
TYPE
165 results
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Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
differential activity
Fine-mapped variants
caQTL
variant allelic effects
primary cell
hepatocyte
8
1
13
3
1
4
1
1
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
1
1
pancreatic endothelial cell
1
3
stromal cell of bone marrow
2
1
1
+ See 4 more…
tissue
liver
4
13
1
10
9
2
1
7
1
1
right lobe of liver
2
1
1
1
1
3
cell line
HepG2
2
2
3
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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