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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
1
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
1
February, 2020
1
March, 2020
1
October, 2022
Available data
137
bed bed3+
33
bed bed9
3
bigWig
tsv
Organism
173
Homo sapiens
Biosample type
132
tissue
34
cell line
7
primary cell
Organ
610
epithelium
385
connective tissue
382
kidney
380
brain
356
musculature of body
310
lung
286
intestine
217
bodily fluid
217
limb
215
heart
206
blood
205
embryo
202
skin of body
195
pancreas
187
vasculature
172
large intestine
146
blood vessel
146
extraembryonic component
125
liver
117
stomach
105
eye
87
mammary gland
84
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
64
adipose tissue
64
penis
62
lymph node
61
ureter
54
artery
48
gonad
48
thymus
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
20
vein
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
16
nerve
12
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
167
AMP
6
ENCODE
Genome assembly (visualization)
170
hg19
43
GRCh38
month_released!
May, 2020
files.file_type!
tsv
BIOSAMPLE
TYPE
173 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 5 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
pericardium fibroblast
1
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