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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
90
candidate regulatory elements
53
target gene predictions
44
chromatin state
18
accessible chromatin
18
binding sites
9
histone modifications
3
gene expression
2
eQTL
Date released
122
September, 2022
73
February, 2021
15
June, 2020
6
May, 2021
6
November, 2021
3
August, 2017
3
February, 2024
3
October, 2022
2
January, 2022
2
March, 2024
1
February, 2020
1
March, 2020
Available data
191
bed bed3+
41
bed bed9
3
bigWig
2
tsv
Organism
237
Homo sapiens
Biosample type
134
tissue
96
cell line
7
primary cell
Organ
934
epithelium
633
kidney
450
connective tissue
447
brain
370
musculature of body
311
lung
289
intestine
271
pancreas
251
vasculature
244
heart
234
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
88
bone element
87
mammary gland
86
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
231
AMP
6
ENCODE
Genome assembly (visualization)
232
hg19
51
GRCh38
month_released!
May, 2020
BIOSAMPLE
TYPE
237 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 7 more…
cell line
GM12864
2
1
1
1
2
1
GM12865
2
1
1
1
2
1
HT-29
2
2
1
1
1
1
MM.1S
2
2
1
1
1
1
SW480
2
1
1
1
1
1
+ See 18 more…
primary cell
colon epithelial cell
3
3
pericardium fibroblast
1
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