Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
62
target gene predictions
18
candidate regulatory elements
8
chromatin state
7
binding sites
5
accessible chromatin
3
eQTL
3
gene expression
3
histone modifications
Date released
51
February, 2024
24
September, 2022
18
February, 2021
4
June, 2020
3
January, 2022
3
March, 2024
2
May, 2021
2
November, 2021
2
October, 2022
Available data
95
bed bed3+
8
bed bed9
3
tsv
1
bigWig
Organism
109
Homo sapiens
Biosample type
72
cell line
31
tissue
6
primary cell
Organ
934
epithelium
633
kidney
448
connective tissue
447
brain
370
musculature of body
311
lung
289
intestine
271
pancreas
251
vasculature
244
heart
234
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
88
bone element
87
mammary gland
86
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
107
AMP
2
ENCODE
Genome assembly (visualization)
103
hg19
64
GRCh38
month_released!
May, 2020
BIOSAMPLE
TYPE
109 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
eQTL
gene expression
histone modifications
cell line
HeLa-S3
55
5
3
1
NT2-D1 cell
1
1
1
2
1
Ishikawa
1
NT2/D1
1
tissue
testis
3
7
3
1
1
1
1
1
uterus
2
3
1
1
1
1
endometrium cancer
1
1
cervix - ectocervix
1
endometrium
1
primary cell
Ishikawa
1
1
1
uterine smooth muscle cell
1
1
Leydig cell
1
Download