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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
143
gene expression
110
accessible chromatin
100
candidate regulatory elements
53
chromatin state
53
target gene predictions
43
binding sites
41
variant allelic effects
28
differential activity
28
histone modifications
3
eQTL
2
caQTL
Date released
196
February, 2021
151
September, 2022
76
February, 2024
36
March, 2023
May, 2021
25
June, 2020
23
August, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
376
bed bed3+
152
tsv
81
bigWig
78
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
604
Homo sapiens
Biosample type
494
primary cell
60
tissue
26
cell line
24
in vitro differentiated cells
Organ
604
epithelium
509
kidney
455
brain
368
connective tissue
358
musculature of body
295
lung
264
intestine
241
heart
241
limb
219
vasculature
214
bodily fluid
206
embryo
204
pancreas
203
blood
189
skin of body
176
blood vessel
163
large intestine
148
liver
140
extraembryonic component
108
stomach
105
eye
86
adipose tissue
86
bone element
79
mammary gland
79
small intestine
79
uterus
76
prostate gland
70
placenta
68
artery
64
ureter
63
penis
61
adrenal gland
61
lymph node
47
gonad
47
thymus
42
spinal cord
41
esophagus
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
vein
20
ovary
20
thyroid gland
19
mouth
18
skeleton
13
bronchus
12
breast
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
604
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
429
hg19
107
GRCh38
month_released!
May, 2021
BIOSAMPLE
TYPE
604 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
chromatin state
target gene predictions
binding sites
variant allelic effects
differential activity
histone modifications
eQTL
caQTL
primary cell
hepatocyte
13
7
1
1
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell
8
4
2
2
1
1
2
endothelial cell of umbilical vein
2
6
5
3
2
1
+ See 84 more…
tissue
pigmented layer of retina
20
esophagus squamous epithelium
1
6
2
2
breast epithelium
1
5
2
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
cell line
EndoC_BH1
1
1
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 2 more…
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