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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
39
target gene predictions
36
chromatin state
10
accessible chromatin
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
41
February, 2021
7
June, 2020
6
November, 2021
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
Available data
126
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
163
Homo sapiens
Biosample type
130
tissue
27
cell line
6
primary cell
Organ
872
epithelium
644
kidney
439
brain
413
connective tissue
362
musculature of body
298
lung
277
intestine
242
vasculature
240
heart
239
limb
238
pancreas
195
embryo
185
blood vessel
181
skin of body
168
bodily fluid
163
large intestine
158
blood
140
extraembryonic component
140
liver
117
stomach
103
eye
84
adipose tissue
83
small intestine
81
bone element
77
uterus
73
mammary gland
71
adrenal gland
69
placenta
68
prostate gland
67
artery
64
ureter
56
penis
49
lymph node
47
thymus
46
gonad
45
esophagus
40
spinal cord
32
spleen
25
nerve
24
lymphoid tissue
23
testis
22
ovary
22
thyroid gland
19
lymphatic vessel
19
mouth
19
vein
18
skeleton
14
bronchus
12
breast
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
pituitary gland
3
trachea
1
pericardium
Project
157
AMP
6
ENCODE
Genome assembly (visualization)
159
hg19
43
GRCh38
month_released!
May, 2021
April, 2019
annotation_type!
binding sites
BIOSAMPLE
TYPE
163 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
gene expression
tissue
large intestine
27
13
13
1
1
sigmoid colon
10
6
5
1
transverse colon
8
4
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 6 more…
cell line
HCT116
2
3
1
HT-29
2
1
1
1
1
SW480
2
1
1
1
1
RKO
1
1
1
colon epithelial cell
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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