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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1190
target gene predictions
862
histone modifications
849
accessible chromatin
817
binding sites
124
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
2
pQTL
2
variant to gene
1
other
1
sQTL
Date released
2409
February, 2021
1678
September, 2022
333
November, 2021
293
February, 2024
288
June, 2020
May, 2021
135
May, 2020
101
October, 2022
66
January, 2020
January, 2021
52
August, 2021
45
March, 2020
41
November, 2022
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5582
bed bed3+
864
bed bed9
810
tsv
505
bigWig
108
txt
35
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5536
Homo sapiens
Biosample type
2070
cell line
1821
tissue
1360
primary cell
325
in vitro differentiated cells
4
stem cell
Organ
510
epithelium
315
connective tissue
309
kidney
298
brain
275
musculature of body
235
lung
222
intestine
186
bodily fluid
177
blood
173
embryo
172
limb
170
heart
160
skin of body
160
vasculature
132
large intestine
124
pancreas
120
blood vessel
109
extraembryonic component
98
eye
98
liver
91
stomach
74
uterus
71
mammary gland
68
bone element
63
small intestine
61
prostate gland
55
adrenal gland
55
placenta
53
lymph node
53
penis
51
ureter
46
adipose tissue
44
artery
37
thymus
36
gonad
33
esophagus
28
spinal cord
25
spleen
19
testis
18
lymphoid tissue
16
ovary
16
thyroid gland
16
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
9
bone marrow
8
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
1
pituitary gland
Project
5225
AMP
333
ENCODE
19
LungMap
4
T1D
1
ITG
Genome assembly (visualization)
5574
hg19
703
GRCh38
1
hg18
month_released!
May, 2021
January, 2021
BIOSAMPLE
TYPE
5582 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
pQTL
variant to gene
other
sQTL
cell line
HeLa-S3
5
54
1
A549
21
18
1
1
2
H1-hESC
1
38
1
1
2
K562
7
22
1
1
2
1
MCF-7
9
5
2
1
3
+ See 757 more…
tissue
heart
37
20
1
5
1
2
stomach
40
19
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 214 more…
primary cell
common myeloid progenitor, CD34-positive
27
13
B cell
14
9
6
endothelial cell
6
1
14
2
2
2
1
fibroblast
4
16
1
6
CD4-positive, alpha-beta memory T cell
14
9
+ See 320 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
2
1
4
1
4
T-cell acute lymphoblastic leukemia
5
3
mesenchymal stem cell
3
2
1
1
1
+ See 101 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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