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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
234
accessible chromatin
207
candidate regulatory elements
165
target gene predictions
123
chromatin state
92
differential activity
75
histone modifications
57
binding sites
56
variant allelic effects
36
Fine-mapped variants
32
eQTL
2
caQTL
Date released
325
September, 2022
302
February, 2021
158
September, 2023
127
November, 2021
77
February, 2024
45
June, 2020
May, 2021
44
March, 2020
41
January, 2020
38
March, 2023
32
May, 2020
27
February, 2020
23
August, 2021
January, 2021
18
January, 2022
15
November, 2022
12
February, 2023
11
October, 2022
9
August, 2017
7
April, 2020
6
August, 2018
5
October, 2019
4
May, 2019
3
March, 2024
2
May, 2022
2
November, 2019
1
July, 2020
Available data
794
bed bed3+
374
tsv
185
bigWig
114
bed bed9
78
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1333
Homo sapiens
Biosample type
805
primary cell
409
tissue
91
cell line
28
in vitro differentiated cells
1
stem cell
Organ
895
epithelium
652
kidney
455
brain
442
connective tissue
369
musculature of body
307
lung
283
intestine
263
vasculature
251
heart
241
limb
224
pancreas
214
bodily fluid
208
embryo
203
blood
201
blood vessel
199
skin of body
169
large intestine
153
liver
143
extraembryonic component
117
stomach
109
eye
87
bone element
86
adipose tissue
85
mammary gland
83
small intestine
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
12
breast
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
1043
AMP
155
KPMP
127
ENCODE
7
LungMap
2
community
Genome assembly (visualization)
959
hg19
382
GRCh38
month_released!
May, 2021
January, 2021
BIOSAMPLE
TYPE
1334 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
8
14
6
1
2
2
1
2
hepatocyte
13
8
1
2
1
4
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
3
5
2
1
+ See 152 more…
tissue
brain
1
2
29
16
18
3
1
1
2
caudate nucleus
1
2
5
3
4
1
1
3
2
pigmented layer of retina
20
substantia nigra
1
5
2
3
1
3
3
cerebellum
2
1
3
2
2
1
3
2
+ See 76 more…
cell line
SK-N-DZ
1
4
2
2
1
SK-N-SH
4
2
2
1
SK-N-MC
1
2
1
1
1
2
BE(2)-C
1
1
1
1
1
2
Daoy
1
2
1
1
1
+ See 18 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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