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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
933
target gene predictions
842
histone modifications
811
binding sites
584
gene expression
500
accessible chromatin
167
differential activity
140
variant allelic effects
40
eQTL
36
chromatin state
5
caQTL
4
variant to gene
3
pQTL
2
Fine-mapped variants
2
other
2
sQTL
1
representative DNase hypersensitivity sites
Date released
2579
February, 2021
1672
September, 2022
May, 2021
289
June, 2020
286
September, 2023
162
February, 2024
144
May, 2020
99
October, 2022
95
August, 2021
70
March, 2023
56
January, 2021
56
March, 2020
44
November, 2022
May, 2022
39
February, 2020
35
August, 2017
30
March, 2024
26
February, 2023
21
January, 2020
19
April, 2020
9
August, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2022
1
July, 2020
1
June, 2021
1
November, 2019
1
November, 2020
1
October, 2019
Available data
4926
bed bed3+
704
tsv
157
bigWig
108
txt
24
csv
16
bigBed narrowPeak
4
bam
4
bigBed bed9
3
bed gappedPeak
3
xls
Organism
5696
Homo sapiens
Biosample type
1917
cell line
1885
tissue
1569
primary cell
366
in vitro differentiated cells
4
stem cell
Organ
680
epithelium
547
kidney
319
connective tissue
303
brain
270
musculature of body
227
lung
204
intestine
183
pancreas
176
vasculature
163
limb
161
bodily fluid
158
heart
152
blood
152
skin of body
128
embryo
127
blood vessel
126
large intestine
106
extraembryonic component
93
eye
91
liver
84
stomach
65
bone element
65
mammary gland
63
adipose tissue
62
prostate gland
59
small intestine
53
lymph node
53
penis
53
placenta
48
ureter
46
adrenal gland
45
artery
36
gonad
36
thymus
31
esophagus
29
spinal cord
25
spleen
23
uterus
20
testis
18
lymphoid tissue
17
vein
16
lymphatic vessel
15
ovary
15
thyroid gland
14
mouth
14
nerve
12
bronchus
10
bone marrow
9
breast
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
2
pituitary gland
1
pericardium
Project
5372
AMP
281
KPMP
57
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
6617
hg19
GRCh38
4
hg18
month_released!
May, 2021
May, 2022
assembly!
GRCh38
BIOSAMPLE
TYPE
5743 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
gene expression
accessible chromatin
differential activity
variant allelic effects
eQTL
chromatin state
caQTL
variant to gene
pQTL
Fine-mapped variants
other
sQTL
representative DNase hypersensitivity sites
cell line
A549
21
18
1
2
1
MCF-7
9
5
2
3
1
breast cancer cell
11
9
K562
7
6
1
2
1
1
H1-hESC
1
1
1
2
8
1
+ See 755 more…
tissue
heart
37
20
1
1
3
2
2
stomach
40
19
1
1
3
kidney
29
14
2
1
7
1
1
1
brain
29
16
3
1
1
1
1
lung
33
17
1
+ See 232 more…
primary cell
common myeloid progenitor, CD34-positive
27
13
B cell
14
9
3
CD4-positive, alpha-beta memory T cell
14
9
epithelial cell of proximal tubule
2
1
1
16
1
regulatory T cell
5
4
1
1
5
5
+ See 368 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
neural progenitor cell
5
5
2
7
adipocyte
4
2
1
1
1
4
4
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 109 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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