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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1654
candidate regulatory elements
1208
target gene predictions
923
chromatin state
883
accessible chromatin
863
histone modifications
817
binding sites
591
gene expression
167
differential activity
165
eQTL
138
variant allelic effects
74
Fine-mapped variants
13
caQTL
4
variant to gene
3
pQTL
2
other
2
sQTL
1
representative DNase hypersensitivity sites
Date released
287
June, 2020
220
November, 2021
65
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
873
bed bed3+
513
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
838
Homo sapiens
Biosample type
469
primary cell
194
tissue
156
cell line
64
in vitro differentiated cells
Organ
205
epithelium
88
connective tissue
59
eye
57
pancreas
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
615
AMP
220
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
875
hg19
377
GRCh38
month_released!
May, 2021
May, 2019
organ_slims!
esophagus
BIOSAMPLE
TYPE
883 results
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Clear Filters
accessible chromatin
primary cell
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
pericyte cell
10
+ See 216 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
heart
5
islet of Langerhans
5
+ See 93 more…
cell line
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
A-673 cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
adipocyte
4
+ See 30 more…
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