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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
21
candidate regulatory elements
21
gene expression
17
target gene predictions
16
chromatin state
14
histone modifications
13
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
43
September, 2022
26
February, 2024
25
February, 2021
10
August, 2021
10
March, 2020
5
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
May, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
95
bed bed3+
25
tsv
23
bigWig
13
bed bed9
1
bam
1
bigBed bed9
Organism
146
Homo sapiens
Biosample type
62
primary cell
57
tissue
27
cell line
in vitro differentiated cells
Organ
891
epithelium
651
kidney
451
brain
400
connective tissue
368
musculature of body
307
lung
283
intestine
261
vasculature
251
heart
241
limb
241
pancreas
214
bodily fluid
203
blood
201
blood vessel
190
skin of body
181
embryo
169
large intestine
146
liver
extraembryonic component
117
stomach
103
eye
89
bone element
85
adipose tissue
83
small intestine
82
mammary gland
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
61
lymph node
57
penis
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
3
pituitary gland
1
pericardium
Project
141
AMP
5
ENCODE
Genome assembly (visualization)
117
hg19
59
GRCh38
2
hg18
month_released!
May, 2021
organ_slims!
extraembryonic component
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
146 results
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Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
8
1
13
2
1
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
4
13
1
9
9
2
1
7
1
1
right lobe of liver
2
1
1
1
1
3
cell line
HepG2
2
2
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
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