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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
215
gene expression
161
accessible chromatin
107
target gene predictions
93
candidate regulatory elements
89
differential activity
49
chromatin state
37
variant allelic effects
34
binding sites
22
histone modifications
3
eQTL
2
caQTL
Date released
185
February, 2021
155
September, 2023
139
September, 2022
122
November, 2021
47
February, 2024
34
March, 2023
May, 2021
22
June, 2020
20
August, 2021
20
January, 2021
12
January, 2020
12
May, 2020
9
February, 2020
7
April, 2020
6
August, 2018
5
October, 2019
5
October, 2022
3
August, 2017
2
February, 2023
2
March, 2020
2
March, 2024
2
May, 2022
1
November, 2019
Available data
455
bed bed3+
287
tsv
141
bigWig
78
txt
46
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
812
Homo sapiens
Biosample type
734
primary cell
39
tissue
28
cell line
11
in vitro differentiated cells
Organ
915
epithelium
652
kidney
455
brain
444
connective tissue
369
musculature of body
307
lung
283
intestine
263
vasculature
251
heart
244
pancreas
241
limb
214
bodily fluid
208
embryo
203
blood
201
blood vessel
199
skin of body
169
large intestine
liver
143
extraembryonic component
117
stomach
eye
89
bone element
86
adipose tissue
85
mammary gland
83
small intestine
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
506
AMP
155
KPMP
122
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
504
hg19
196
GRCh38
month_released!
May, 2021
organ_slims!
liver
eye
BIOSAMPLE
TYPE
812 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
8
15
7
2
2
1
1
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
3
6
5
1
2
foreskin keratinocyte
4
11
4
+ See 140 more…
tissue
esophagus squamous epithelium
1
2
6
2
breast epithelium
1
2
5
2
kidney epithelium
1
1
pancreatic ductal cell
2
breast - mammary tissue
1
+ See 13 more…
cell line
EndoC_BH1
1
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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