Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
470
accessible chromatin
410
gene expression
328
candidate regulatory elements
325
target gene predictions
197
chromatin state
152
differential activity
100
binding sites
96
histone modifications
81
variant allelic effects
41
eQTL
11
caQTL
Date released
487
September, 2022
456
February, 2021
331
November, 2021
281
September, 2023
May, 2021
152
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
31
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1414
bed bed3+
521
tsv
396
bigWig
164
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2166
Homo sapiens
Biosample type
2601
tissue
2289
cell line
2211
primary cell
431
in vitro differentiated cells
4
stem cell
Organ
803
epithelium
309
kidney
274
connective tissue
167
vasculature
114
pancreas
112
blood vessel
96
skin of body
62
liver
50
musculature of body
45
mammary gland
40
penis
39
extraembryonic component
35
brain
33
lung
30
heart
28
artery
23
eye
23
intestine
21
embryo
19
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
9
blood
9
bodily fluid
9
prostate gland
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
ovary
1
adipose tissue
1
pericardium
1
testis
1
thymus
Project
1521
AMP
331
ENCODE
281
KPMP
59
T1D
19
LungMap
Genome assembly (visualization)
1614
hg19
608
GRCh38
month_released!
May, 2021
organ_slims!
ovary
BIOSAMPLE
TYPE
2211 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
common myeloid progenitor, CD34-positive
27
13
13
endothelial cell
15
8
7
2
1
2
1
2
B cell
6
14
9
8
CD4-positive, alpha-beta memory T cell
14
9
9
hepatocyte
8
13
1
2
1
1
4
2
+ See 438 more…
See all biosamples
Download