Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
56
target gene predictions
49
candidate regulatory elements
48
binding sites
29
chromatin state
27
histone modifications
14
accessible chromatin
2
eQTL
1
gene expression
1
pQTL
Date released
79
February, 2021
78
September, 2022
28
February, 2024
19
October, 2022
12
June, 2020
May, 2021
3
August, 2021
2
August, 2017
2
January, 2021
1
March, 2024
1
May, 2020
1
May, 2022
1
November, 2021
Available data
197
bed bed3+
26
bed bed9
2
bigWig
1
bed bed9+
1
tsv
Organism
227
Homo sapiens
Biosample type
201
cell line
22
primary cell
4
tissue
Organ
915
epithelium
652
kidney
455
brain
444
connective tissue
369
musculature of body
307
lung
283
intestine
263
vasculature
251
heart
244
pancreas
241
limb
214
bodily fluid
208
embryo
203
blood
201
blood vessel
199
skin of body
169
large intestine
153
liver
143
extraembryonic component
117
stomach
109
eye
89
bone element
86
adipose tissue
85
mammary gland
83
small intestine
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
spleen
26
testis
25
nerve
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
224
AMP
2
T1D
1
ENCODE
Genome assembly (visualization)
226
hg19
55
GRCh38
month_released!
May, 2021
organ_slims!
spleen
BIOSAMPLE
TYPE
227 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
pQTL
cell line
K562
22
7
2
7
1
1
GM12878
7
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
1
2
1
1
1
HL-60
1
2
2
1
1
1
+ See 26 more…
primary cell
peripheral blood mononuclear cell
4
1
1
megakaryocyte
2
2
stromal cell of bone marrow
1
2
1
mononuclear cell of bone marrow
2
1
peripheral blood stem cell
1
1
1
+ See 2 more…
tissue
blood
2
cerebrospinal fluid
1
whole blood
1
See all biosamples
Download