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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
236
gene expression
193
accessible chromatin
112
target gene predictions
100
candidate regulatory elements
92
differential activity
51
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
3
eQTL
2
caQTL
Date released
196
February, 2021
155
September, 2023
151
September, 2022
127
November, 2021
76
February, 2024
38
March, 2023
May, 2021
25
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
518
bed bed3+
307
tsv
164
bigWig
78
txt
48
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
901
Homo sapiens
Biosample type
790
primary cell
60
tissue
27
cell line
24
in vitro differentiated cells
Organ
901
epithelium
638
kidney
432
connective tissue
426
brain
364
musculature of body
307
lung
283
intestine
247
vasculature
240
pancreas
239
heart
234
limb
214
bodily fluid
208
embryo
203
blood
199
skin of body
190
blood vessel
169
large intestine
150
liver
143
extraembryonic component
117
stomach
107
eye
89
bone element
85
mammary gland
83
small intestine
82
adipose tissue
81
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
artery
63
penis
61
lymph node
61
ureter
49
gonad
48
thymus
45
esophagus
41
spinal cord
33
spleen
26
testis
24
lymphoid tissue
24
nerve
22
ovary
22
thyroid gland
21
lymphatic vessel
20
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
590
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
569
hg19
220
GRCh38
month_released!
May, 2021
January, 2020
BIOSAMPLE
TYPE
901 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
8
15
7
2
2
1
1
2
hepatocyte
13
7
2
1
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
1
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 146 more…
tissue
pigmented layer of retina
20
esophagus squamous epithelium
1
2
6
2
breast epithelium
1
2
5
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
cell line
EndoC_BH1
1
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 2 more…
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