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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
236
gene expression
183
accessible chromatin
112
target gene predictions
100
candidate regulatory elements
91
differential activity
51
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
3
eQTL
1
caQTL
Date released
196
February, 2021
155
September, 2023
151
September, 2022
127
November, 2021
76
February, 2024
38
March, 2023
May, 2021
25
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
January, 2020
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
507
bed bed3+
306
tsv
157
bigWig
78
txt
48
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
889
Homo sapiens
Biosample type
789
primary cell
50
tissue
26
cell line
24
in vitro differentiated cells
Organ
889
epithelium
638
kidney
433
connective tissue
426
brain
364
musculature of body
307
lung
283
intestine
243
vasculature
239
pancreas
236
heart
234
limb
214
bodily fluid
208
embryo
203
blood
199
skin of body
186
blood vessel
169
large intestine
150
liver
143
extraembryonic component
117
stomach
89
bone element
85
mammary gland
83
eye
83
small intestine
82
adipose tissue
81
uterus
76
prostate gland
72
placenta
71
adrenal gland
66
artery
63
penis
61
lymph node
61
ureter
49
gonad
48
thymus
45
esophagus
41
spinal cord
33
spleen
26
testis
24
lymphoid tissue
24
nerve
22
ovary
22
thyroid gland
21
lymphatic vessel
20
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
578
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
559
hg19
219
GRCh38
month_released!
May, 2021
January, 2020
February, 2023
BIOSAMPLE
TYPE
889 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
8
15
7
2
2
1
1
1
hepatocyte
13
7
2
1
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
1
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 146 more…
tissue
esophagus squamous epithelium
1
2
6
2
breast epithelium
1
2
5
2
pigmented layer of retina
10
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
cell line
EndoC_BH1
1
1
2
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 2 more…
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