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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
39
target gene predictions
10
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
2
eQTL
2
gene expression
Date released
65
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
132
bed bed3+
bed bed9
3
bigWig
2
tsv
Organism
136
Homo sapiens
Biosample type
102
tissue
28
cell line
6
primary cell
Organ
865
epithelium
575
kidney
401
connective tissue
389
brain
298
musculature of body
237
lung
231
pancreas
231
vasculature
228
intestine
205
heart
191
limb
189
bodily fluid
181
embryo
180
blood
174
blood vessel
165
skin of body
139
liver
136
large intestine
110
extraembryonic component
100
eye
94
stomach
78
adipose tissue
77
uterus
75
bone element
71
mammary gland
65
artery
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
53
lymph node
53
penis
51
ureter
41
gonad
38
esophagus
37
thymus
34
spinal cord
27
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
18
ovary
18
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
12
bone marrow
10
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
130
AMP
6
ENCODE
Genome assembly (visualization)
132
hg19
10
GRCh38
month_released!
May, 2021
files.file_type!
bed bed9
BIOSAMPLE
TYPE
136 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
eQTL
gene expression
tissue
large intestine
27
13
1
1
sigmoid colon
10
6
1
transverse colon
8
4
1
1
colonic mucosa
4
2
1
1
mucosa of rectum
4
2
1
+ See 7 more…
cell line
HT-29
2
1
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
RKO
1
1
1
1
HCT-116 cell
1
2
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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