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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
39
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
March, 2024
1
March, 2020
1
October, 2022
Available data
132
bed bed3+
33
bed bed9
3
bigWig
Organism
167
Homo sapiens
Biosample type
129
tissue
32
cell line
6
primary cell
Organ
913
epithelium
650
kidney
454
brain
442
connective tissue
367
musculature of body
306
lung
280
intestine
262
vasculature
251
heart
244
pancreas
240
limb
213
bodily fluid
208
embryo
202
blood
200
blood vessel
197
skin of body
167
large intestine
153
liver
143
extraembryonic component
115
stomach
109
eye
89
bone element
86
adipose tissue
85
mammary gland
83
small intestine
79
uterus
75
prostate gland
73
artery
72
placenta
70
adrenal gland
64
ureter
63
penis
61
lymph node
48
thymus
47
gonad
43
esophagus
42
spinal cord
32
spleen
25
nerve
25
testis
23
lymphoid tissue
21
lymphatic vessel
21
ovary
21
thyroid gland
21
vein
18
mouth
18
skeleton
16
bronchus
13
bone marrow
11
breast
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
2
pituitary gland
1
pericardium
Project
161
AMP
6
ENCODE
Genome assembly (visualization)
165
hg19
43
GRCh38
month_released!
May, 2021
March, 2024
BIOSAMPLE
TYPE
167 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
tissue
large intestine
27
13
13
1
1
sigmoid colon
10
6
5
1
transverse colon
8
4
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 5 more…
cell line
HT-29
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
RKO
1
1
1
1
HCT-116 cell
1
2
+ See 3 more…
primary cell
colon epithelial cell
3
3
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