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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
149
candidate regulatory elements
104
target gene predictions
98
accessible chromatin
84
chromatin state
48
gene expression
37
binding sites
30
histone modifications
21
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
218
September, 2022
155
February, 2021
56
November, 2021
27
June, 2020
21
February, 2024
May, 2021
17
September, 2023
13
October, 2022
11
August, 2021
10
August, 2017
10
January, 2020
10
March, 2020
10
May, 2020
9
February, 2020
8
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
449
bed bed3+
74
bed bed9
62
tsv
58
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
611
Homo sapiens
Biosample type
280
primary cell
223
tissue
63
cell line
44
in vitro differentiated cells
1
stem cell
Organ
915
epithelium
652
kidney
455
brain
442
connective tissue
369
musculature of body
307
lung
283
intestine
263
vasculature
251
heart
244
pancreas
241
limb
214
bodily fluid
208
embryo
203
blood
201
blood vessel
199
skin of body
169
large intestine
153
liver
143
extraembryonic component
117
stomach
109
eye
89
bone element
86
adipose tissue
85
mammary gland
83
small intestine
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
531
AMP
56
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
539
hg19
165
GRCh38
2
hg18
month_released!
May, 2021
BIOSAMPLE
TYPE
611 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
osteoblast
2
1
5
1
2
3
2
fibroblast of lung
6
3
4
2
foreskin fibroblast
6
1
1
1
4
2
+ See 41 more…
tissue
large intestine
27
13
1
13
1
adipose tissue
7
7
2
6
3
1
4
1
sigmoid colon
10
6
1
5
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
+ See 16 more…
cell line
GM23248
2
1
1
1
1
1
HT-29
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
+ See 15 more…
in vitro differentiated cells
adipocyte
4
2
4
6
1
1
1
mesenchymal stem cell
3
2
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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