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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
61
accessible chromatin
40
target gene predictions
35
differential activity
33
gene expression
28
candidate regulatory elements
19
chromatin state
15
eQTL
11
variant allelic effects
7
binding sites
7
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
50
September, 2022
47
March, 2023
36
February, 2021
May, 2021
25
February, 2024
21
November, 2021
20
January, 2021
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
5
June, 2020
5
September, 2023
4
January, 2020
4
January, 2022
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
April, 2020
1
February, 2023
1
January, 2018
1
June, 2021
Available data
158
bed bed3+
65
tsv
60
bigWig
15
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
265
Homo sapiens
Biosample type
131
primary cell
109
tissue
20
cell line
5
in vitro differentiated cells
Organ
915
epithelium
652
kidney
455
brain
444
connective tissue
369
musculature of body
307
lung
283
intestine
263
vasculature
251
heart
244
pancreas
241
limb
214
bodily fluid
208
embryo
203
blood
201
blood vessel
199
skin of body
169
large intestine
153
liver
143
extraembryonic component
117
stomach
109
eye
89
bone element
86
adipose tissue
85
mammary gland
83
small intestine
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
216
AMP
21
ENCODE
20
T1D
5
KPMP
2
community
1
LungMap
Genome assembly (visualization)
187
hg19
66
GRCh38
month_released!
May, 2021
BIOSAMPLE
TYPE
265 results
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Clear Filters
accessible chromatin
target gene predictions
differential activity
gene expression
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic beta cell
8
3
3
2
1
pancreatic ductal cell
6
2
3
2
1
1
2
pancreatic alpha cell
7
3
3
2
1
pancreatic delta cell
5
4
3
2
1
pancreatic acinar cell
6
2
3
2
1
+ See 14 more…
tissue
islet of Langerhans
5
1
9
3
13
1
2
1
2
2
2
body of pancreas
4
2
8
4
1
1
3
pancreas
5
4
5
3
1
1
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
1
1
3
1
Panc1
1
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
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