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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
89
accessible chromatin
46
gene expression
40
candidate regulatory elements
33
binding sites
27
histone modifications
25
target gene predictions
21
eQTL
16
variant allelic effects
14
differential activity
8
chromatin state
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
September, 2022
113
February, 2021
50
November, 2021
21
June, 2020
18
February, 2024
17
September, 2023
May, 2021
12
October, 2022
11
August, 2021
10
January, 2020
10
May, 2020
9
February, 2020
9
March, 2020
7
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
242
bed bed3+
62
tsv
55
bigWig
7
txt
2
bigBed bed9
1
bed bed9
1
bigBed narrowPeak
Organism
329
Homo sapiens
Biosample type
206
primary cell
68
tissue
32
in vitro differentiated cells
22
cell line
1
stem cell
Organ
764
epithelium
427
kidney
324
connective tissue
275
brain
200
pancreas
188
vasculature
165
musculature of body
143
heart
141
blood vessel
139
bodily fluid
134
blood
127
embryo
119
intestine
107
liver
103
limb
97
lung
97
skin of body
82
eye
71
large intestine
69
uterus
62
adipose tissue
52
artery
48
stomach
47
bone element
44
extraembryonic component
43
mammary gland
37
lymph node
37
prostate gland
33
penis
29
adrenal gland
26
small intestine
25
gonad
25
ureter
24
esophagus
24
placenta
18
spinal cord
16
nerve
16
vein
15
lymphatic vessel
15
spleen
15
thymus
14
testis
10
bone marrow
10
bronchus
10
ovary
10
thyroid gland
9
lymphoid tissue
9
skeleton
7
mouth
6
breast
5
trachea
4
tongue
4
urinary bladder
4
vagina
3
pituitary gland
1
nose
1
pericardium
Project
253
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
259
hg19
82
GRCh38
2
hg18
month_released!
May, 2021
September, 2022
BIOSAMPLE
TYPE
329 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
binding sites
histone modifications
target gene predictions
eQTL
variant allelic effects
differential activity
chromatin state
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
1
4
2
6
pericyte cell
10
9
osteoblast
5
2
1
3
2
foreskin fibroblast
1
5
4
2
pancreatic stellate cell
2
2
1
3
+ See 40 more…
tissue
subcutaneous adipose tissue
2
5
2
6
1
1
1
3
adipose tissue
2
3
1
1
1
4
1
omental fat pad
2
2
3
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 4 more…
in vitro differentiated cells
adipocyte
4
1
2
1
1
4
chondrocyte
5
mesenchymal stem cell
1
1
1
1
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
fibroblast of cardiac tissue
2
1
2
GM23248
1
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
hepatic stellate cell
1
1
+ See 6 more…
stem cell
mesenchymal stem cell
1
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