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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
943
chromatin state
901
accessible chromatin
817
binding sites
683
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
65
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
February, 2021
November, 2019
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
891
bed bed3+
516
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
1
tsv
Organism
857
Homo sapiens
Biosample type
484
primary cell
188
tissue
162
cell line
68
in vitro differentiated cells
Organ
211
epithelium
88
connective tissue
63
pancreas
59
eye
50
kidney
42
brain
33
vasculature
27
musculature of body
23
blood vessel
23
heart
23
liver
21
intestine
18
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
artery
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
nerve
2
ovary
2
spinal cord
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
spleen
1
tongue
1
trachea
1
urinary bladder
Project
632
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
893
hg19
380
GRCh38
month_released!
November, 2019
BIOSAMPLE
TYPE
902 results
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Clear Filters
accessible chromatin
representative DNase hypersensitivity sites
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 217 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
5
pancreas
5
+ See 94 more…
cell line
EndoC_BH1
7
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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