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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
1
March, 2020
1
October, 2022
Available data
137
bed bed3+
33
bed bed9
3
bigWig
Organism
170
Homo sapiens
Biosample type
130
tissue
34
cell line
6
primary cell
Organ
599
epithelium
422
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
235
limb
226
heart
217
bodily fluid
206
blood
205
embryo
201
vasculature
199
skin of body
184
pancreas
170
large intestine
156
blood vessel
145
extraembryonic component
123
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
58
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
31
spleen
23
lymphoid tissue
23
testis
21
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
164
AMP
6
ENCODE
Genome assembly (visualization)
170
hg19
43
GRCh38
month_released!
November, 2019
BIOSAMPLE
TYPE
170 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 4 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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