Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
643
binding sites
584
histone modifications
402
target gene predictions
327
candidate regulatory elements
192
chromatin state
162
accessible chromatin
21
gene expression
10
differential activity
10
eQTL
4
variant allelic effects
Date released
1304
February, 2021
542
September, 2022
168
February, 2024
152
June, 2020
70
October, 2022
63
May, 2021
10
January, 2022
9
August, 2021
9
March, 2020
9
March, 2023
7
May, 2022
6
August, 2017
2
May, 2020
1
February, 2023
1
January, 2020
1
March, 2024
November, 2019
1
September, 2023
Available data
2128
bed bed3+
179
bed bed9
22
tsv
7
bed bed9+
3
bigWig
Organism
2355
Homo sapiens
Biosample type
2642
tissue
2469
primary cell
2351
cell line
468
in vitro differentiated cells
4
stem cell
Organ
205
bodily fluid
195
blood
128
embryo
96
lung
78
brain
70
skin of body
65
uterus
62
lymph node
53
bone element
53
prostate gland
42
epithelium
41
kidney
36
mammary gland
34
intestine
34
large intestine
33
pancreas
32
connective tissue
28
liver
17
musculature of body
15
penis
11
vasculature
10
eye
10
pituitary gland
9
heart
7
gonad
7
limb
7
testis
6
blood vessel
6
lymphoid tissue
4
artery
4
mouth
3
adipose tissue
3
extraembryonic component
3
placenta
3
spinal cord
2
lymphatic vessel
2
vein
Project
2346
AMP
9
community
Genome assembly (visualization)
2313
hg19
364
GRCh38
1
hg18
month_released!
November, 2019
BIOSAMPLE
TYPE
2355 results
search-icon
table-tab-icon
Clear Filters
binding sites
histone modifications
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
gene expression
differential activity
eQTL
variant allelic effects
cell line
HeLa-S3
1
55
5
3
A549
2
1
19
21
18
1
H1-hESC
2
1
39
1
1
1
8
K562
2
1
23
7
7
1
MCF-7
3
2
6
9
5
1
+ See 765 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download