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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
accessible chromatin
23
candidate regulatory elements
target gene predictions
17
chromatin state
14
histone modifications
13
binding sites
7
eQTL
4
gene expression
4
variant allelic effects
1
caQTL
Date released
32
September, 2022
22
February, 2021
16
February, 2024
10
August, 2021
5
June, 2020
4
March, 2020
4
November, 2021
3
August, 2017
3
May, 2020
2
January, 2020
2
May, 2022
1
January, 2022
November, 2019
1
October, 2022
1
September, 2018
Available data
79
bed bed3+
tsv
22
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
106
Homo sapiens
Biosample type
41
primary cell
39
tissue
23
cell line
3
in vitro differentiated cells
Organ
502
epithelium
326
kidney
322
brain
317
connective tissue
281
musculature of body
232
lung
213
intestine
176
limb
174
heart
168
vasculature
160
bodily fluid
158
skin of body
155
pancreas
151
blood
129
blood vessel
128
large intestine
121
embryo
110
extraembryonic component
106
liver
98
eye
87
stomach
69
bone element
68
mammary gland
62
prostate gland
61
small intestine
56
placenta
54
adipose tissue
53
lymph node
53
penis
51
adrenal gland
51
ureter
49
artery
37
gonad
35
thymus
33
esophagus
29
spinal cord
24
spleen
23
uterus
21
testis
18
vein
17
lymphoid tissue
16
thyroid gland
15
nerve
15
ovary
15
skeleton
14
mouth
13
bronchus
13
lymphatic vessel
10
bone marrow
9
breast
7
tongue
7
vagina
6
urinary bladder
5
trachea
3
nose
2
pituitary gland
1
pericardium
Project
102
AMP
4
ENCODE
Genome assembly (visualization)
98
hg19
45
GRCh38
2
hg18
month_released!
November, 2019
files.file_type!
tsv
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
106 results
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Clear Filters
accessible chromatin
candidate regulatory elements
chromatin state
histone modifications
binding sites
eQTL
gene expression
variant allelic effects
caQTL
primary cell
hepatocyte
8
1
1
4
1
4
2
endothelial cell of hepatic sinusoid
6
6
hepatic stellate cell
3
1
1
1
1
Liver fetal (hepatocyte)
1
tissue
liver
3
13
9
2
1
7
1
right lobe of liver
2
1
cell line
HepG2
2
2
2
5
3
HuH-7
1
1
1
1
1
HuH-7.5
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
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