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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1218
target gene predictions
862
histone modifications
824
accessible chromatin
817
binding sites
124
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
2
pQTL
2
variant to gene
1
sQTL
Date released
2409
February, 2021
1678
September, 2022
333
November, 2021
293
February, 2024
288
June, 2020
May, 2021
135
May, 2020
101
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
45
March, 2020
November, 2022
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5584
bed bed3+
863
bed bed9
812
tsv
510
bigWig
108
txt
34
bed bed9+
34
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5538
Homo sapiens
Biosample type
2069
cell line
1795
tissue
1407
primary cell
308
in vitro differentiated cells
4
stem cell
Organ
514
epithelium
310
connective tissue
309
kidney
298
brain
275
musculature of body
235
lung
222
intestine
186
bodily fluid
177
blood
173
embryo
170
limb
167
heart
160
skin of body
157
vasculature
142
pancreas
132
large intestine
117
blood vessel
109
extraembryonic component
97
liver
91
stomach
76
eye
74
uterus
71
mammary gland
70
bone element
63
small intestine
61
prostate gland
55
adrenal gland
55
placenta
53
lymph node
53
penis
51
ureter
45
adipose tissue
42
artery
37
thymus
36
gonad
33
esophagus
28
spinal cord
24
spleen
19
testis
18
lymphoid tissue
16
ovary
16
thyroid gland
16
vein
15
skeleton
14
bronchus
14
lymphatic vessel
13
mouth
13
nerve
11
bone marrow
8
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
1
pituitary gland
Project
5171
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5576
hg19
691
GRCh38
1
hg18
month_released!
November, 2019
November, 2022
May, 2021
BIOSAMPLE
TYPE
5584 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
54
1
A549
21
18
1
1
2
H1-hESC
1
38
1
1
2
K562
7
22
1
1
2
1
MCF-7
9
5
2
1
3
+ See 757 more…
tissue
heart
37
20
1
4
1
2
stomach
40
19
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 214 more…
primary cell
common myeloid progenitor, CD34-positive
27
13
endothelial cell
7
1
15
2
2
2
1
B cell
14
9
6
fibroblast
4
16
1
6
CD4-positive, alpha-beta memory T cell
14
9
+ See 323 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
2
1
3
1
4
T-cell acute lymphoblastic leukemia
5
3
mesenchymal stem cell
3
2
1
1
1
+ See 99 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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