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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1663
candidate regulatory elements
1352
target gene predictions
975
histone modifications
887
accessible chromatin
815
binding sites
123
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
pQTL
2
variant to gene
1
other
1
sQTL
Date released
2402
February, 2021
1670
September, 2022
331
November, 2021
292
February, 2024
286
June, 2020
285
May, 2021
135
May, 2020
101
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
45
March, 2020
41
November, 2022
34
August, 2017
31
February, 2023
18
April, 2020
15
May, 2022
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5889
bed bed3+
899
tsv
864
bed bed9
532
bigWig
108
txt
39
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5843
Homo sapiens
Biosample type
2124
cell line
1834
tissue
1581
primary cell
345
in vitro differentiated cells
4
stem cell
Organ
546
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
173
limb
170
heart
165
skin of body
160
vasculature
157
pancreas
137
large intestine
120
blood vessel
112
extraembryonic component
100
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
44
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
25
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
bronchus
14
lymphatic vessel
13
mouth
13
nerve
11
bone marrow
11
pituitary gland
9
breast
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5479
AMP
331
ENCODE
60
T1D
18
LungMap
1
ITG
Genome assembly (visualization)
5881
hg19
786
GRCh38
1
hg18
month_released!
November, 2019
organ_slims!
tongue
bronchus
BIOSAMPLE
TYPE
5889 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
pQTL
variant to gene
other
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 760 more…
tissue
heart
37
20
1
4
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 216 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 326 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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