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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
213
accessible chromatin
131
target gene predictions
116
candidate regulatory elements
92
differential activity
61
chromatin state
45
binding sites
41
variant allelic effects
28
histone modifications
5
eQTL
3
Fine-mapped variants
2
caQTL
Date released
205
February, 2021
175
September, 2022
155
September, 2023
127
November, 2021
76
February, 2024
38
March, 2023
35
May, 2021
27
June, 2020
23
August, 2021
20
January, 2021
15
January, 2020
15
May, 2020
15
November, 2022
12
February, 2023
10
February, 2020
9
March, 2020
7
April, 2020
7
October, 2022
6
August, 2018
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
January, 2022
1
July, 2020
November, 2019
Available data
575
bed bed3+
329
tsv
175
bigWig
78
txt
58
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
991
Homo sapiens
Biosample type
823
primary cell
97
tissue
45
cell line
26
in vitro differentiated cells
Organ
948
epithelium
651
kidney
465
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
274
pancreas
263
vasculature
246
heart
242
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
201
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
680
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
640
hg19
246
GRCh38
month_released!
November, 2019
April, 2019
BIOSAMPLE
TYPE
991 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 147 more…
tissue
spinal cord
1
8
14
7
1
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
C1 segment of cervical spinal cord
1
1
3
+ See 17 more…
cell line
EndoC_BH1
8
7
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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