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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1554
candidate regulatory elements
1287
target gene predictions
961
histone modifications
876
chromatin state
860
accessible chromatin
802
binding sites
654
gene expression
163
differential activity
158
eQTL
128
variant allelic effects
62
Fine-mapped variants
12
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
1
representative DNase hypersensitivity sites
Date released
278
June, 2020
218
November, 2021
57
January, 2020
54
May, 2020
44
November, 2022
40
February, 2024
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
13
May, 2022
November, 2019
9
October, 2019
6
September, 2022
4
February, 2021
4
January, 2022
2
November, 2020
2
September, 2018
1
June, 2021
Available data
850
bed bed3+
491
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
815
Homo sapiens
Biosample type
467
primary cell
168
tissue
158
cell line
67
in vitro differentiated cells
Organ
211
epithelium
88
connective tissue
63
pancreas
59
eye
50
kidney
42
brain
33
vasculature
27
musculature of body
23
blood vessel
23
heart
liver
21
intestine
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
artery
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
nerve
2
ovary
2
spinal cord
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
spleen
1
tongue
1
trachea
1
urinary bladder
Project
594
AMP
218
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
852
hg19
351
GRCh38
month_released!
November, 2019
organ_slims!
limb
liver
BIOSAMPLE
TYPE
860 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 214 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
5
pancreas
5
+ See 79 more…
cell line
EndoC_BH1
7
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
A-673 cell
1
+ See 145 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
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