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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
51
accessible chromatin
42
target gene predictions
35
gene expression
33
differential activity
25
candidate regulatory elements
15
chromatin state
10
binding sites
10
histone modifications
8
variant allelic effects
Date released
46
September, 2022
41
March, 2023
33
February, 2021
28
May, 2021
22
January, 2021
19
November, 2021
15
February, 2024
7
August, 2018
6
June, 2020
5
October, 2019
2
May, 2020
1
February, 2023
1
June, 2021
1
March, 2020
1
May, 2022
November, 2019
1
October, 2022
Available data
144
bed bed3+
59
tsv
42
bigWig
14
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
1
bed bed9+
Organism
229
Homo sapiens
Biosample type
140
primary cell
tissue
86
cell line
3
in vitro differentiated cells
Organ
887
epithelium
365
connective tissue
351
kidney
214
bodily fluid
204
blood
182
vasculature
180
embryo
179
skin of body
162
pancreas
130
lung
120
blood vessel
117
brain
98
liver
85
mammary gland
70
uterus
69
musculature of body
67
bone element
63
prostate gland
62
lymph node
62
penis
57
intestine
48
extraembryonic component
41
heart
40
large intestine
39
eye
33
artery
22
vein
21
lymphatic vessel
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
186
AMP
22
T1D
19
ENCODE
2
community
Genome assembly (visualization)
161
hg19
38
GRCh38
month_released!
November, 2019
biosample_type!
tissue
BIOSAMPLE
TYPE
229 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
differential activity
candidate regulatory elements
chromatin state
binding sites
histone modifications
variant allelic effects
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 18 more…
cell line
EndoC_BH1
7
1
8
3
1
MG63
1
1
2
1
1
1
OCI-LY1
1
2
1
1
1
SJSA1
1
1
2
1
1
L1-S8
1
1
2
1
+ See 12 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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