Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
66
accessible chromatin
56
target gene predictions
50
gene expression
48
candidate regulatory elements
33
differential activity
27
chromatin state
18
eQTL
11
variant allelic effects
9
binding sites
7
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
74
September, 2022
49
February, 2021
47
March, 2023
34
May, 2021
25
February, 2024
20
January, 2021
18
November, 2021
10
March, 2020
8
August, 2021
7
August, 2018
7
January, 2022
7
June, 2020
6
May, 2020
6
October, 2019
4
January, 2020
3
August, 2017
November, 2019
2
February, 2020
2
March, 2024
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
201
bed bed3+
78
tsv
55
bigWig
23
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
334
Homo sapiens
Biosample type
164
tissue
127
primary cell
40
cell line
3
in vitro differentiated cells
Organ
948
epithelium
652
kidney
465
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
275
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
201
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
294
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
238
hg19
72
GRCh38
month_released!
November, 2019
BIOSAMPLE
TYPE
334 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
differential activity
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
islet of Langerhans
5
1
11
3
13
1
2
1
2
2
2
spleen
1
8
1
15
6
1
1
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
testis
1
3
1
7
3
1
1
1
+ See 8 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 13 more…
cell line
EndoC_BH1
7
1
8
3
1
NT2-D1 cell
1
1
1
1
2
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download