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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
21
target gene predictions
17
chromatin state
14
accessible chromatin
14
candidate regulatory elements
8
eQTL
8
gene expression
7
histone modifications
3
Fine-mapped variants
3
differential activity
3
variant allelic effects
2
binding sites
1
caQTL
Date released
46
September, 2022
February, 2024
February, 2021
10
August, 2021
10
March, 2020
5
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
63
bed bed3+
14
bed bed9
11
tsv
8
bigWig
1
bam
1
bigBed bed9
Organism
101
Homo sapiens
Biosample type
47
tissue
31
primary cell
20
cell line
3
in vitro differentiated cells
Organ
677
epithelium
463
kidney
355
brain
330
connective tissue
268
musculature of body
240
lung
221
pancreas
212
intestine
202
heart
200
vasculature
186
limb
153
blood vessel
135
skin of body
125
large intestine
116
bodily fluid
113
extraembryonic component
111
embryo
109
blood
101
liver
91
eye
88
stomach
66
small intestine
64
adipose tissue
60
artery
58
adrenal gland
58
mammary gland
55
placenta
53
bone element
48
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
lymph node
34
spinal cord
33
esophagus
24
spleen
22
nerve
22
uterus
19
ovary
18
lymphoid tissue
18
testis
18
thyroid gland
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
10
breast
10
bronchus
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
96
AMP
5
ENCODE
Genome assembly (visualization)
86
hg19
35
GRCh38
2
hg18
month_released!
November, 2020
February, 2021
February, 2024
BIOSAMPLE
TYPE
101 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
candidate regulatory elements
eQTL
gene expression
histone modifications
Fine-mapped variants
differential activity
variant allelic effects
binding sites
caQTL
tissue
liver
10
9
4
7
7
1
1
right lobe of liver
1
1
1
1
1
3
primary cell
hepatocyte
3
1
3
1
5
3
1
hepatic stellate cell
1
1
3
1
1
pancreatic endothelial cell
1
3
endothelial cell of hepatic sinusoid
2
Liver fetal (hepatocyte)
1
cell line
HepG2
3
2
1
1
4
2
HuH-7
1
1
1
1
HuH-7.5
1
1
1
in vitro differentiated cells
hepatocyte
1
1
1
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