Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
58
target gene predictions
9
candidate regulatory elements
4
chromatin state
3
accessible chromatin
3
binding sites
2
gene expression
2
histone modifications
1
eQTL
Date released
51
February, 2024
12
September, 2022
10
February, 2021
2
June, 2020
2
March, 2024
2
May, 2021
2
November, 2021
1
January, 2022
October, 2022
Available data
75
bed bed3+
4
bed bed9
2
tsv
1
bigWig
Organism
82
Homo sapiens
Biosample type
64
cell line
13
tissue
5
primary cell
Organ
937
epithelium
647
kidney
436
connective tissue
422
brain
363
musculature of body
306
lung
286
intestine
268
pancreas
250
vasculature
240
heart
235
limb
213
embryo
200
skin of body
199
bodily fluid
190
blood vessel
188
blood
172
large intestine
145
extraembryonic component
145
liver
118
stomach
107
eye
88
bone element
84
mammary gland
83
small intestine
82
uterus
81
adipose tissue
78
prostate gland
72
adrenal gland
72
placenta
68
artery
64
ureter
62
penis
60
lymph node
48
gonad
48
thymus
44
esophagus
39
spinal cord
33
spleen
25
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
80
AMP
2
ENCODE
Genome assembly (visualization)
79
hg19
58
GRCh38
month_released!
November, 2020
March, 2020
October, 2022
BIOSAMPLE
TYPE
82 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
eQTL
cell line
HeLa-S3
55
5
3
Ishikawa
1
tissue
uterus
2
3
1
1
1
1
endometrium cancer
1
1
cervix - ectocervix
1
endometrium
1
primary cell
Ishikawa
1
1
1
uterine smooth muscle cell
1
1
Download