Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
130
target gene predictions
123
candidate regulatory elements
98
accessible chromatin
76
binding sites
73
chromatin state
49
gene expression
49
histone modifications
23
eQTL
16
variant allelic effects
14
differential activity
2
caQTL
2
pQTL
Date released
189
September, 2022
179
February, 2021
50
November, 2021
46
February, 2024
32
June, 2020
31
October, 2022
20
May, 2021
17
September, 2023
13
August, 2021
10
January, 2020
10
May, 2020
9
August, 2017
9
February, 2020
March, 2020
7
March, 2023
7
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
506
bed bed3+
64
bed bed9
59
tsv
53
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
655
Homo sapiens
Biosample type
289
primary cell
226
cell line
91
tissue
49
in vitro differentiated cells
Organ
943
epithelium
649
kidney
448
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
254
vasculature
240
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
192
blood vessel
173
large intestine
146
extraembryonic component
146
liver
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
579
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
582
hg19
165
GRCh38
2
hg18
month_released!
November, 2020
March, 2020
BIOSAMPLE
TYPE
655 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
binding sites
chromatin state
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
1
10
1
fibroblast of lung
4
6
2
4
foreskin fibroblast
2
6
1
4
1
2
osteoblast
2
2
3
3
1
1
2
+ See 46 more…
cell line
K562
23
7
1
2
7
1
GM12878
8
2
1
2
2
1
GM06990
1
2
1
2
1
1
GM19240
2
1
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 35 more…
tissue
adipose tissue
7
7
2
1
6
3
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
omental fat pad
2
5
2
2
2
2
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 8 more…
in vitro differentiated cells
adipocyte
6
4
4
1
6
1
1
mesenchymal stem cell
3
3
1
1
2
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
See all biosamples
Download