Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
41
target gene predictions
chromatin state
7
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
65
September, 2022
46
February, 2021
7
June, 2020
November, 2021
5
May, 2021
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
128
bed bed3+
2
tsv
Organism
132
Homo sapiens
Biosample type
102
tissue
30
cell line
Organ
769
epithelium
572
kidney
394
brain
360
connective tissue
290
musculature of body
242
pancreas
231
lung
227
vasculature
211
intestine
194
heart
194
limb
191
bodily fluid
185
embryo
182
blood
173
blood vessel
159
skin of body
134
liver
132
large intestine
110
extraembryonic component
96
eye
86
stomach
79
adipose tissue
77
uterus
73
bone element
67
artery
66
mammary gland
65
prostate gland
60
small intestine
55
placenta
54
lymph node
54
penis
51
ureter
49
adrenal gland
40
gonad
37
thymus
35
spinal cord
34
esophagus
28
spleen
22
testis
21
nerve
19
lymphoid tissue
18
vein
17
ovary
17
thyroid gland
16
lymphatic vessel
15
mouth
15
skeleton
13
pituitary gland
12
bronchus
11
breast
10
bone marrow
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
132
AMP
Genome assembly (visualization)
128
hg19
4
GRCh38
month_released!
November, 2021
annotation_type!
chromatin state
BIOSAMPLE
TYPE
132 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
1
colonic mucosa
4
2
1
mucosa of rectum
4
2
+ See 7 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
See all biosamples
Download