Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1246
target gene predictions
977
histone modifications
944
chromatin state
817
binding sites
691
accessible chromatin
683
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
851
February, 2021
289
June, 2020
November, 2021
140
May, 2021
65
January, 2020
54
May, 2020
49
February, 2024
47
August, 2021
44
November, 2022
28
January, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
12
September, 2022
9
October, 2019
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
1657
bed bed3+
306
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1623
Homo sapiens
Biosample type
747
cell line
472
primary cell
286
tissue
163
in vitro differentiated cells
Organ
162
epithelium
90
brain
81
connective tissue
60
pancreas
59
eye
53
kidney
39
vasculature
37
bodily fluid
36
blood
34
liver
29
blood vessel
26
heart
26
musculature of body
22
limb
21
embryo
21
skin of body
20
bone element
18
intestine
16
artery
13
lung
12
large intestine
12
lymph node
12
prostate gland
11
extraembryonic component
9
mammary gland
8
adipose tissue
8
penis
8
skeleton
5
gonad
5
placenta
4
stomach
4
ureter
4
uterus
3
bone marrow
3
bronchus
3
lymphatic vessel
3
lymphoid tissue
3
nerve
3
testis
3
trachea
3
vein
2
esophagus
2
spinal cord
2
spleen
2
thymus
1
adrenal gland
1
breast
1
mouth
1
nose
1
ovary
1
pituitary gland
1
small intestine
1
thyroid gland
1
tongue
1
urinary bladder
Project
1620
AMP
29
T1D
19
LungMap
Genome assembly (visualization)
1659
hg19
275
GRCh38
month_released!
November, 2021
BIOSAMPLE
TYPE
1668 results
search-icon
table-tab-icon
Clear Filters
histone modifications
accessible chromatin
cell line
breast cancer cell
11
EndoC_BH1
1
8
Rhabdomyosarcoma
8
1
gastric cancer cell
9
neuroblastoma cell
8
+ See 518 more…
primary cell
monocyte
86
18
CD8-positive, alpha-beta T cell
30
3
hepatocyte
4
7
osteoblast
2
5
endothelial cell
1
5
+ See 187 more…
tissue
retina
1
23
pigmented layer of retina
20
kidney
2
10
islet of Langerhans
1
6
heart
1
5
+ See 153 more…
in vitro differentiated cells
neural progenitor cell
15
10
embryonic stem cell
1
6
neuroblastoma cell line
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
+ See 75 more…
See all biosamples
Download